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gptkbp:instanceOf
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gptkb:software
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gptkbp:citation
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Kent WJ. BLAT—the BLAST-like alignment tool. Genome Res. 2002 Apr;12(4):656-64.
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gptkbp:developer
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gptkb:Jim_Kent
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gptkbp:fasterThan
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gptkb:BLAST
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gptkbp:feature
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command-line interface available
fast alignment of DNA and protein sequences
supports large genomes
supports spliced alignments
web interface available
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gptkbp:firstReleased
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2002
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gptkbp:format
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gptkb:PSL
gptkb:TwoBit
gptkb:BLAST
gptkb:FASTA
gptkb:SAM
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gptkbp:fullName
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gptkb:BLAST-Like_Alignment_Tool
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https://www.w3.org/2000/01/rdf-schema#label
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BLAT alignment tool
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gptkbp:license
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open source
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gptkbp:maintainedBy
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gptkb:UCSC_Genome_Bioinformatics_Group
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gptkbp:operatingSystem
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gptkb:Windows
gptkb:Mac_OS_X
Unix-like
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gptkbp:programmingLanguage
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C
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gptkbp:purpose
|
sequence alignment
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gptkbp:relatedTo
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gptkb:Bowtie
gptkb:BLAST
BWA
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gptkbp:usedFor
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gene finding
genome analysis
transcriptome analysis
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gptkbp:website
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https://genome.ucsc.edu/FAQ/FAQblat.html
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gptkbp:bfsParent
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gptkb:UCSC_Genome_Browser
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gptkbp:bfsLayer
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5
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