Triple
T3439013
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Yersinia pestis |
E72523
|
entity |
| Predicate | family |
P566
|
FINISHED |
| Object |
Yersiniaceae
Yersiniaceae is a family of Gram-negative bacteria that includes several medically important genera, notably the plague-causing pathogen Yersinia.
|
E357720
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Yersiniaceae | Statement: [Yersinia pestis, family, Yersiniaceae]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Yersiniaceae Context triple: [Yersinia pestis, family, Yersiniaceae]
-
A.
Bacillaceae
Bacillaceae is a family of Gram-positive, rod-shaped, endospore-forming bacteria that includes medically and environmentally significant genera such as Bacillus.
-
B.
Rousselia
Rousselia is a genus of flowering plants in the hemp family Cannabaceae, native to tropical regions of the Americas.
-
C.
Corynebacteriales
Corynebacteriales is an order of Gram-positive bacteria that includes medically important genera such as Mycobacterium and Corynebacterium, some of which cause serious human diseases.
-
D.
Bacillales
Bacillales is an order of Gram-positive, rod-shaped bacteria that includes medically and environmentally important genera such as Bacillus and Staphylococcus.
-
E.
Vibrionaceae
Vibrionaceae is a family of Gram-negative, mostly aquatic bacteria that includes several medically important pathogens such as Vibrio cholerae, the causative agent of cholera.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Yersiniaceae Triple: [Yersinia pestis, family, Yersiniaceae]
Generated description
Yersiniaceae is a family of Gram-negative bacteria that includes several medically important genera, notably the plague-causing pathogen Yersinia.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Yersiniaceae Target entity description: Yersiniaceae is a family of Gram-negative bacteria that includes several medically important genera, notably the plague-causing pathogen Yersinia.
-
A.
Bacillaceae
Bacillaceae is a family of Gram-positive, rod-shaped, endospore-forming bacteria that includes medically and environmentally significant genera such as Bacillus.
-
B.
Rousselia
Rousselia is a genus of flowering plants in the hemp family Cannabaceae, native to tropical regions of the Americas.
-
C.
Corynebacteriales
Corynebacteriales is an order of Gram-positive bacteria that includes medically important genera such as Mycobacterium and Corynebacterium, some of which cause serious human diseases.
-
D.
Bacillales
Bacillales is an order of Gram-positive, rod-shaped bacteria that includes medically and environmentally important genera such as Bacillus and Staphylococcus.
-
E.
Vibrionaceae
Vibrionaceae is a family of Gram-negative, mostly aquatic bacteria that includes several medically important pathogens such as Vibrio cholerae, the causative agent of cholera.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69ad85af50288190a854b76653deee6f |
completed | March 8, 2026, 2:20 p.m. |
| NER | Named-entity recognition | batch_69adb9f6de1481909b789f4b0e1113d3 |
completed | March 8, 2026, 6:03 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69b35483d0488190b6a4bd2ed65f78d3 |
completed | March 13, 2026, 12:04 a.m. |
| NEDg | Description generation | batch_69b358b368648190840d1dee4a659a32 |
completed | March 13, 2026, 12:22 a.m. |
| NED2 | Entity disambiguation (via description) | batch_69b3593c810c819080f5370601750133 |
completed | March 13, 2026, 12:24 a.m. |
Created at: March 8, 2026, 3:16 p.m.