Triple

T32196297
Position Surface form Disambiguated ID Type / Status
Subject PD-1 E822412 entity
Predicate cytoplasmicTailRecruits P173314 FINISHED
Object SHP-2 phosphatase
SHP-2 phosphatase is a protein tyrosine phosphatase that modulates intracellular signaling pathways, particularly those regulating cell growth, differentiation, and immune responses.
 E1995670 NE FINISHED

How this triple was built (3 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: SHP-2 phosphatase | Statement: [PD-1, cytoplasmicTailRecruits, SHP-2 phosphatase]
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: SHP-2 phosphatase
Triple: [PD-1, cytoplasmicTailRecruits, SHP-2 phosphatase]
Generated description
SHP-2 phosphatase is a protein tyrosine phosphatase that modulates intracellular signaling pathways, particularly those regulating cell growth, differentiation, and immune responses.
PD Predicate disambiguation gpt-5-mini-2025-08-07 
Target predicate: cytoplasmicTailRecruits
Context triple: [PD-1, cytoplasmicTailRecruits, SHP-2 phosphatase]
  • A. cellularComponent
    Indicates the relationship between a biological entity and the specific cellular location or structure in which it is physically present or functions.
  • B. cellularOrganization
    Indicates how the components within a biological cell are structured, arranged, and functionally organized in relation to one another.
  • C. targetCellEntryReceptor
    Indicates that a receptor mediates or enables the entry of a target cell (or agent) into another cell.
  • D. receptor
    Indicates that one entity functions as a receptor for another, typically binding or receiving a signal, substance, or stimulus from it.
  • E. cellBiologyFeature
    Indicates a relationship where a biological entity possesses or is characterized by a specific cellular-level property, structure, or function.
  • F. None of above. chosen

Provenance (7 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69f349093174819086e633c190a51aa8 completed April 30, 2026, 12:20 p.m.
NER Named-entity recognition batch_69f6bb3795fc8190bfcb00d45aa887a1 completed May 3, 2026, 3:04 a.m.
NED1 Entity disambiguation (via context triple) batch_6a2f0bec98288190b1480ba26b1e4eb6 completed June 14, 2026, 8:15 p.m.
NEDg Description generation batch_6a2f0ca5db008190a1de72d58c55d0bb completed June 14, 2026, 8:18 p.m.
NED2 Entity disambiguation (via description) batch_6a2f0e1ead7c8190bada929583412e06 completed June 14, 2026, 8:25 p.m.
PD Predicate disambiguation batch_69f6b3aa892481908d29283a074e6722 completed May 3, 2026, 2:32 a.m.
PDg Predicate description generation batch_69f6b42902a081909126c7322858a2b3 completed May 3, 2026, 2:34 a.m.
Created at: May 1, 2026, 12:36 a.m.