Triple
T22693126
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | WDR41 |
E561101
|
entity |
| Predicate | hasFullName |
P16
|
FINISHED |
| Object | WD repeat domain 41 |
—
|
NE NERFINISHED |
How this triple was built (3 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: WD repeat domain 41 | Statement: [WDR41, hasFullName, WD repeat domain 41]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: WD repeat domain 41 Context triple: [WDR41, hasFullName, WD repeat domain 41]
-
A.
SMCR8-WDR41 complex
The SMCR8-WDR41 complex is a protein assembly that partners with C9orf72 to regulate autophagy and lysosomal function, particularly in the context of neurodegenerative disease mechanisms.
-
B.
Cdh1
Cdh1 is a regulatory protein that activates the anaphase-promoting complex/cyclosome (APC/C) to control mitotic exit and G1 phase progression in the cell cycle.
-
C.
LIN-12/Notch repeats
LIN-12/Notch repeats are a series of conserved extracellular protein motifs characteristic of Notch family receptors that mediate protein–protein interactions crucial for Notch signaling.
-
D.
cyclin D2
Cyclin D2 is a regulatory protein that controls progression through the G1 phase of the cell cycle by activating cyclin-dependent kinases involved in cell proliferation.
-
E.
Wnt1
Wnt1 is a highly conserved signaling protein in the Wnt family that plays a crucial role in embryonic development, cell fate determination, and oncogenesis in vertebrates.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: WD repeat domain 41 Target entity description: WD repeat domain 41 (WDR41) is a human protein characterized by WD repeat motifs and is implicated in diverse cellular processes such as signal transduction and protein complex assembly.
-
A.
SMCR8-WDR41 complex
chosen
The SMCR8-WDR41 complex is a protein assembly that partners with C9orf72 to regulate autophagy and lysosomal function, particularly in the context of neurodegenerative disease mechanisms.
-
B.
Cdh1
Cdh1 is a regulatory protein that activates the anaphase-promoting complex/cyclosome (APC/C) to control mitotic exit and G1 phase progression in the cell cycle.
-
C.
LIN-12/Notch repeats
LIN-12/Notch repeats are a series of conserved extracellular protein motifs characteristic of Notch family receptors that mediate protein–protein interactions crucial for Notch signaling.
-
D.
interleukin-4 receptor alpha
Interleukin-4 receptor alpha is a key immune cell surface receptor subunit that mediates signaling of the cytokines IL-4 and IL-13, playing a central role in allergic inflammation and type 2 immune responses.
-
E.
cyclin D2
Cyclin D2 is a regulatory protein that controls progression through the G1 phase of the cell cycle by activating cyclin-dependent kinases involved in cell proliferation.
- F. None of above.
Provenance (2 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2454d71b48190a1f80af9f82b6fcf |
completed | April 17, 2026, 2:35 p.m. |
| NER | Named-entity recognition | batch_69f1789c6ae481908975b7d27e7624ac |
completed | April 29, 2026, 3:18 a.m. |
Created at: April 17, 2026, 3:13 p.m.