Triple

T19245362
Position Surface form Disambiguated ID Type / Status
Subject INS gene E481234 entity
Predicate memberOfPathway P134658 FINISHED
Object insulin signaling pathway
The insulin signaling pathway is a cellular communication network through which insulin regulates glucose uptake, metabolism, and growth-related processes in target tissues.
E1365589 NE FINISHED

How this triple was built (5 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: insulin signaling pathway | Statement: [INS gene, memberOfPathway, insulin signaling pathway]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: insulin signaling pathway
Context triple: [INS gene, memberOfPathway, insulin signaling pathway]
  • A. PI3K-AKT signaling pathway
    The PI3K-AKT signaling pathway is a key intracellular cascade that regulates cell growth, survival, metabolism, and proliferation, and is frequently dysregulated in cancer.
  • B. MAPK signaling pathway
    The MAPK signaling pathway is a key intracellular cascade that transmits growth and survival signals from cell surface receptors to the nucleus, regulating processes such as proliferation, differentiation, and apoptosis.
  • C. insulin
    Insulin is a peptide hormone produced by the pancreas that regulates blood glucose levels and is essential in the treatment of diabetes.
  • D. JAK-STAT signaling pathway
    The JAK-STAT signaling pathway is a key intracellular cascade that transmits signals from cell-surface receptors to the nucleus to regulate gene expression involved in cell growth, differentiation, immune function, and survival.
  • E. Preiss–Handler pathway
    The Preiss–Handler pathway is a metabolic route in which cells convert nicotinic acid (niacin) into NAD+, a vital coenzyme involved in redox reactions and energy metabolism.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: insulin signaling pathway
Triple: [INS gene, memberOfPathway, insulin signaling pathway]
Generated description
The insulin signaling pathway is a cellular communication network through which insulin regulates glucose uptake, metabolism, and growth-related processes in target tissues.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: insulin signaling pathway
Target entity description: The insulin signaling pathway is a cellular communication network through which insulin regulates glucose uptake, metabolism, and growth-related processes in target tissues.
  • A. PI3K-AKT signaling pathway
    The PI3K-AKT signaling pathway is a key intracellular cascade that regulates cell growth, survival, metabolism, and proliferation, and is frequently dysregulated in cancer.
  • B. MAPK signaling pathway
    The MAPK signaling pathway is a key intracellular cascade that transmits growth and survival signals from cell surface receptors to the nucleus, regulating processes such as proliferation, differentiation, and apoptosis.
  • C. insulin
    Insulin is a peptide hormone produced by the pancreas that regulates blood glucose levels and is essential in the treatment of diabetes.
  • D. JAK-STAT signaling pathway
    The JAK-STAT signaling pathway is a key intracellular cascade that transmits signals from cell-surface receptors to the nucleus to regulate gene expression involved in cell growth, differentiation, immune function, and survival.
  • E. Preiss–Handler pathway
    The Preiss–Handler pathway is a metabolic route in which cells convert nicotinic acid (niacin) into NAD+, a vital coenzyme involved in redox reactions and energy metabolism.
  • F. None of above. chosen
PD Predicate disambiguation gpt-5-mini-2025-08-07
Target predicate: memberOfPathway
Context triple: [INS gene, memberOfPathway, insulin signaling pathway]
  • A. hasPathway
    Indicates that there exists a route, channel, or sequence of steps through which one entity leads, connects, or gives access to another.
  • B. regulatoryPathway chosen
    Indicates that one entity is part of, or participates in, a biological or organizational regulatory pathway that controls the activity, expression, or behavior of another.
  • C. supportsPathway
    Indicates that one entity contributes to, enables, or maintains the functioning or progression of a specified pathway.
  • D. transferPathwayTo
    Indicates the act of moving or reassigning a pathway (such as a process, route, or channel) from one entity to another.
  • E. nationalPathwayRole
    Indicates the specific role or function an entity holds within a national-level pathway, framework, or process.
  • F. None of above.

Provenance (6 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69d8e8cd9d1081908a181d02b88b59b8 completed April 10, 2026, 12:10 p.m.
NER Named-entity recognition batch_69e5fb2c34e88190a338e5a7ba906425 completed April 20, 2026, 10:08 a.m.
NED1 Entity disambiguation (via context triple) batch_6a0705de9bb88190a2a7b3fed79e95de completed May 15, 2026, 11:39 a.m.
NEDg Description generation batch_6a070661a2888190a4f56a27ddd38cc7 completed May 15, 2026, 11:41 a.m.
NED2 Entity disambiguation (via description) batch_6a0706eb41d88190a77adaf469df30e1 completed May 15, 2026, 11:43 a.m.
PD Predicate disambiguation batch_69e4dd002d00819088b625056edfb74e completed April 19, 2026, 1:47 p.m.
Created at: April 10, 2026, 1:27 p.m.