Properties (55)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
software
|
| gptkbp:availableIn |
GitHub
|
| gptkbp:developedBy |
gptkb:Broad_Institute
|
| gptkbp:hasAmenities |
tutorials
API reference user guide |
| gptkbp:hasClient |
large
|
| gptkbp:hasFeature |
quality control
genome assembly annotation tools variant filtration |
| gptkbp:hasOccupation |
Picard
yes GATK_Native_Library htsjdk |
| gptkbp:hasPersonnel |
Apache License 2.0
|
| gptkbp:hasVersion |
4.2.0
|
| https://www.w3.org/2000/01/rdf-schema#label |
The Genome Analysis Toolkit
|
| gptkbp:isAvailableIn |
Linux
Windows MacOS |
| gptkbp:isCitedIn |
research papers
theses clinical studies |
| gptkbp:isCompatibleWith |
GATK4
GATK3 |
| gptkbp:isIntegratedWith |
cloud computing platforms
data analysis pipelines |
| gptkbp:isOpenTo |
true
|
| gptkbp:isPartOf |
bioinformatics tools
genomic data analysis genomic research genomic medicine precision medicine NGS_analysis |
| gptkbp:isRecognizedBy |
scientific community
|
| gptkbp:isSupportedBy |
academic institutions
community contributions research organizations |
| gptkbp:isUpdatedBy |
true
|
| gptkbp:isUsedBy |
geneticists
bioinformaticians |
| gptkbp:isUsedIn |
research projects
clinical genomics |
| gptkbp:language |
gptkb:Java
|
| gptkbp:provides |
variant calling
data processing tools genome analysis tools |
| gptkbp:publishedIn |
gptkb:Java
|
| gptkbp:releaseDate |
2010
|
| gptkbp:supports |
DNA sequencing
RNA sequencing multi-sample analysis |
| gptkbp:usedFor |
variant_discovery
|
| gptkbp:uses |
GATK_Best_Practices
|