Spatial Transcriptomics

GPTKB entity

Statements (29)
Predicate Object
gptkbp:instanceOf biotechnology method
gptkbp:advantage preserves spatial context of gene expression
unbiased transcriptome-wide analysis
gptkbp:commercialized_by gptkb:10x_Genomics
gptkbp:developedBy gptkb:KTH_Royal_Institute_of_Technology
Joakim Lundeberg
gptkbp:enables identification of spatial gene expression patterns
mapping of RNA transcripts to spatial locations
study of tissue heterogeneity
gptkbp:firstPublished 2016
gptkbp:hasApplication drug development
biomarker discovery
disease diagnostics
https://www.w3.org/2000/01/rdf-schema#label Spatial Transcriptomics
gptkbp:limitation complex data analysis
requires tissue sectioning
resolution depends on array design
gptkbp:relatedTo in situ hybridization
single-cell RNA sequencing
gptkbp:type spatially resolved transcriptomics data
gptkbp:used_in cancer research
developmental biology
neuroscience
gptkbp:usedFor analyzing gene expression in tissue sections
gptkbp:uses next-generation sequencing
microscopy imaging
barcoded oligonucleotide arrays
gptkbp:bfsParent gptkb:10x_Genomics
gptkbp:bfsLayer 7