Statements (33)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
|
| gptkbp:availableOn |
gptkb:GitHub
gptkb:Bioconductor |
| gptkbp:citation |
>2000 (as of 2024)
|
| gptkbp:developedBy |
Blanca Gutierrez-Arcelus
Christine S. C. Ding Sara Aibar Stein Aerts |
| gptkbp:firstPublished |
2017
|
| gptkbp:fullName |
Single-Cell rEgulatory Network Inference and Clustering
|
| https://www.w3.org/2000/01/rdf-schema#label |
SCENIC
|
| gptkbp:inputDataType |
single-cell gene expression matrix
|
| gptkbp:license |
GPL-3.0
|
| gptkbp:producedDataType |
regulatory network
cell clusters regulon activity matrix |
| gptkbp:programmingLanguage |
gptkb:Python
R |
| gptkbp:publishedIn |
Aibar, S. et al. (2017) SCENIC: single-cell regulatory network inference and clustering. Nature Methods.
|
| gptkbp:step |
cell clustering
co-expression network inference regulon activity scoring regulon prediction |
| gptkbp:usedFor |
gene regulatory network inference
cell clustering single-cell RNA-seq data analysis |
| gptkbp:usedIn |
cancer research
developmental biology immunology single-cell transcriptomics |
| gptkbp:website |
https://scenic.aertslab.org/
|
| gptkbp:bfsParent |
gptkb:Scenic_Airlines
|
| gptkbp:bfsLayer |
7
|