RNAstructure

GPTKB entity

Statements (28)
Predicate Object
gptkbp:instanceOf gptkb:software
gptkbp:application bioinformatics
RNA secondary structure prediction
RNA folding
nucleic acid thermodynamics
gptkbp:citation Mathews DH, et al. RNAstructure: software for RNA secondary structure prediction and analysis. Biochemistry. 2004.
gptkbp:developedBy gptkb:University_of_Rochester_Medical_Center
David H. Mathews
gptkbp:features energy minimization
probability calculation
secondary structure prediction
RNA-RNA interaction prediction
bimolecular folding
dot plot generation
partition function calculation
structure comparison
structure drawing
gptkbp:firstReleased 1998
https://www.w3.org/2000/01/rdf-schema#label RNAstructure
gptkbp:latestReleaseVersion 2023
gptkbp:license free for academic use
gptkbp:operatingSystem gptkb:Windows
gptkb:macOS
gptkb:Linux
gptkbp:programmingLanguage gptkb:C++
gptkbp:website https://rna.urmc.rochester.edu/RNAstructure.html
gptkbp:bfsParent gptkb:RosettaRNA
gptkbp:bfsLayer 8