Statements (53)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
|
| gptkbp:application |
metagenomics
microbiome analysis amplicon sequencing data analysis |
| gptkbp:citation |
Bolyen, E., Rideout, J.R., Dillon, M.R., et al. (2019). Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nature Biotechnology, 37(8), 852–857.
|
| gptkbp:developer |
gptkb:Matthew_Dillon
gptkb:Greg_Caporaso Evan Bolyen Jai Ram Rideout Jose Navas-Molina |
| gptkbp:feature |
gptkb:graphical_user_interface
gptkb:data_visualization community support phylogenetic analysis data provenance tracking interactive visualization machine learning integration interactive visualizations provenance tracking reproducible workflows taxonomic classification plugin-based system plugin extensibility diversity analysis metadata integration API for Python Jupyter Notebook integration artifact-based data management community-developed plugins differential abundance testing export to standard formats graphical user interface (QIIME 2 Studio) reproducible science semantic type system tutorials and documentation |
| gptkbp:hasType |
16S rRNA gene sequences
ITS sequences shotgun metagenomics |
| https://www.w3.org/2000/01/rdf-schema#label |
QIIME 2
|
| gptkbp:license |
gptkb:BSD_3-Clause
|
| gptkbp:operatingSystem |
gptkb:Windows
gptkb:macOS gptkb:Linux |
| gptkbp:predecessor |
QIIME
|
| gptkbp:programmingLanguage |
gptkb:Python
gptkb:C++ |
| gptkbp:releaseDate |
2017
|
| gptkbp:usedBy |
ecologists
bioinformaticians microbiologists |
| gptkbp:website |
https://qiime2.org/
|
| gptkbp:bfsParent |
gptkb:QIIME_software
|
| gptkbp:bfsLayer |
7
|