PLINK

GPTKB entity

Statements (29)
Predicate Object
gptkbp:instanceOf genetic analysis software
gptkbp:citation Purcell S, et al. (2007) PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet. 81(3):559-75.
gptkbp:developer Shaun Purcell
gptkbp:field computational biology
genetics
bioinformatics
gptkbp:firstReleased 2007
gptkbp:format gptkb:text
binary
BED/BIM/FAM
PED/MAP
https://www.w3.org/2000/01/rdf-schema#label PLINK
gptkbp:latestReleaseVersion PLINK 2.0
gptkbp:license gptkb:GNU_General_Public_License
gptkbp:operatingSystem Cross-platform
gptkbp:programmingLanguage C
gptkbp:software EIGENSOFT
GCTA
SNPTEST
gptkbp:usedFor genome-wide association studies
association testing
data management for large-scale genetic datasets
linkage disequilibrium analysis
population stratification analysis
quality control of genetic data
gptkbp:website https://www.cog-genomics.org/plink/
gptkbp:bfsParent gptkb:NHLBI_TOPMed_Imputation_Server
gptkb:TOPMed_Imputation_Server
gptkbp:bfsLayer 7