Statements (21)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:algorithm
|
| gptkbp:availableOn |
https://github.com/smirarab/pasta
|
| gptkbp:citation |
Mirarab S, Warnow T. (2015) PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences. Syst Biol. 64(3):407-417.
|
| gptkbp:developedBy |
gptkb:Tandy_Warnow
gptkb:Siavash_Mirarab |
| gptkbp:feature |
scalable to large datasets
iterative refinement uses divide-and-conquer |
| gptkbp:fullName |
Practical Alignment using SATé and TrAnsitivity
|
| https://www.w3.org/2000/01/rdf-schema#label |
PASTA algorithm
|
| gptkbp:improves |
gptkb:SATé_algorithm
|
| gptkbp:input |
DNA sequences
protein sequences |
| gptkbp:openSource |
true
|
| gptkbp:output |
multiple sequence alignment
|
| gptkbp:publicationYear |
2015
|
| gptkbp:publishedIn |
gptkb:Systematic_Biology
|
| gptkbp:usedFor |
multiple sequence alignment
|
| gptkbp:usedIn |
bioinformatics
|
| gptkbp:bfsParent |
gptkb:Tandy_Warnow
|
| gptkbp:bfsLayer |
7
|