Human Metabolome Database

GPTKB entity

Statements (51)
Predicate Object
gptkbp:instanceOf gptkb:database
gptkbp:abbreviation HMDB
gptkbp:access free
gptkbp:citation Wishart DS, et al. Nucleic Acids Res. 2007 Jan;35(Database issue):D521-6.
Wishart DS, et al. Nucleic Acids Res. 2022 Jan;50(D1):D622-D631.
gptkbp:contains clinical data
protein information
chemical data
spectral data
disease associations
gene information
metabolite concentrations
metabolite information
metabolite pathways
metabolite spectra
metabolite structures
molecular biology data
gptkbp:country gptkb:Canada
gptkbp:focus human metabolites
gptkbp:format gptkb:SDF
gptkb:JSON
gptkb:TXT
XML
CSV
https://www.w3.org/2000/01/rdf-schema#label Human Metabolome Database
gptkbp:language English
gptkbp:latestReleaseVersion 2022
HMDB 5.0
gptkbp:license gptkb:Creative_Commons_Attribution
gptkbp:maintainedBy gptkb:University_of_Alberta
gptkbp:numberOfMetabolites over 220,000
gptkbp:numberOfProteinSequences over 5,000
gptkbp:numberOfSpectra over 60,000
gptkbp:relatedTo biochemistry
clinical chemistry
metabolomics
bioinformatics
systems biology
gptkbp:releaseDate 2007
gptkbp:usedFor biomedical research
toxicology
nutrition research
personalized medicine
systems biology
biomarker discovery
clinical diagnostics
drug metabolism studies
metabolomics research
gptkbp:website https://hmdb.ca/
gptkbp:bfsParent gptkb:Metabolomics
gptkbp:bfsLayer 6