ExAC database

GPTKB entity

Statements (51)
Predicate Object
gptkbp:instanceOf genomic database
gptkbp:basedIn gptkb:United_States
gptkbp:citation Lek M, et al. Nature 2016; 536:285-291.
gptkbp:dataSource multiple large-scale sequencing projects
gptkbp:focus exome sequencing data
gptkbp:fullName gptkb:Exome_Aggregation_Consortium_database
https://www.w3.org/2000/01/rdf-schema#label ExAC database
gptkbp:includes allele frequency
single nucleotide variants
variant annotation
functional annotation
gene annotation
protein-coding genes
transcript annotation
gene constraint metrics
gene-level summary statistics
global allele frequencies
indels
loss-of-function variants
missense variants
population stratification
population-specific allele frequencies
quality metrics
sample ancestry
sex information
synonymous variants
variant clinical significance
variant consequence
variant effect prediction
variant evidence level
variant filtering information
variant literature links
variant pathogenicity
variant quality scores
variant references
variant review status
variant zygosity
variant-level summary statistics
gptkbp:maintainedBy gptkb:Broad_Institute
gptkbp:provides over 60,000 individuals
gptkbp:releaseYear 2015
gptkbp:successor gptkb:gnomAD_database
gptkbp:type human exome variants
gptkbp:usedBy geneticists
bioinformaticians
clinical researchers
gptkbp:usedFor population genetics research
variant frequency analysis
gptkbp:website http://exac.broadinstitute.org/
gptkbp:bfsParent gptkb:Exome_Aggregation_Consortium_(ExAC)
gptkbp:bfsLayer 5