EBI ArrayExpress

GPTKB entity

Statements (30)
Predicate Object
gptkbp:instanceOf gptkb:database
gptkbp:acceptsSubmissions researchers worldwide
gptkbp:citation Parkinson H, Kapushesky M, Kolesnikov N, et al. ArrayExpress update—from an archive of functional genomics experiments to the atlas of gene expression. Nucleic Acids Res. 2009 Jan;37(Database issue):D868-72.
gptkbp:focusesOn functional genomics experiments
gptkbp:hasAccessionPrefix gptkb:E-MEXP
gptkb:E-TABM
E-GEOD
gptkbp:hasFeature gptkb:MIAME
gptkbp:hasType ChIP-Seq data
RNA-Seq data
microarray data
other high-throughput functional genomics data
https://www.w3.org/2000/01/rdf-schema#label EBI ArrayExpress
gptkbp:integratesWith gptkb:BioStudies_database
gptkb:Gene_Expression_Omnibus
gptkbp:launched 2002
gptkbp:locatedIn gptkb:Hinxton,_United_Kingdom
gptkbp:maintainedBy gptkb:European_Bioinformatics_Institute
gptkbp:offers downloadable raw and processed data
programmatic access via API
search and browse interfaces
gptkbp:provides public access to functional genomics data
gptkbp:relatedTo gptkb:Expression_Atlas
gptkb:ArrayExpress_Archive
gptkbp:usedFor meta-analysis
data mining
reproducibility of experiments
gptkbp:website https://www.ebi.ac.uk/arrayexpress/
gptkbp:bfsParent gptkb:European_Bioinformatics_Institute
gptkbp:bfsLayer 6