biomaRt package
E1274395
UNEXPLORED
The biomaRt package is an R/Bioconductor tool that provides programmatic access to a wide range of biological databases via the BioMart data management system, enabling flexible retrieval and integration of genomic annotation data.
All labels observed (2)
| Label | Occurrences |
|---|---|
| BioMart data mining tool | 1 |
| biomaRt package canonical | 1 |
How this entity was disambiguated
This entity first appeared as the object of triple T17521735 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: biomaRt package Context triple: [Bioconductor, hasComponent, biomaRt package]
-
A.
Ensembl
Ensembl is a comprehensive genome annotation and browsing platform that provides detailed, regularly updated genomic data for a wide range of species.
-
B.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
C.
Taxonomy Browser
Taxonomy Browser is an online NCBI tool that allows users to explore and retrieve information about the classification and nomenclature of organisms across the tree of life.
-
D.
Bioconductor
Bioconductor is an open-source project that provides R packages and tools for the analysis and comprehension of high-throughput genomic and biological data.
-
E.
GEO DataSets
GEO DataSets is a public NCBI repository that organizes and provides access to curated gene expression and other functional genomics experiment data.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: biomaRt package Target entity description: The biomaRt package is an R/Bioconductor tool that provides programmatic access to a wide range of biological databases via the BioMart data management system, enabling flexible retrieval and integration of genomic annotation data.
-
A.
Ensembl
Ensembl is a comprehensive genome annotation and browsing platform that provides detailed, regularly updated genomic data for a wide range of species.
-
B.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
C.
Taxonomy Browser
Taxonomy Browser is an online NCBI tool that allows users to explore and retrieve information about the classification and nomenclature of organisms across the tree of life.
-
D.
Bioconductor
Bioconductor is an open-source project that provides R packages and tools for the analysis and comprehension of high-throughput genomic and biological data.
-
E.
GEO DataSets
GEO DataSets is a public NCBI repository that organizes and provides access to curated gene expression and other functional genomics experiment data.
- F. None of above. chosen
Referenced by (2)
Full triples — surface form annotated when it differs from this entity's canonical label.