Statements (82)
| Predicate | Object |
|---|---|
| gptkbp:instanceOf |
gptkb:software
|
| gptkbp:category |
gptkb:Bioinformatics
gptkb:Computational_biology Python libraries |
| gptkbp:citation |
Cock, P.J.A. et al. (2009) Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics, 25(11), 1422-1423.
|
| gptkbp:containsCommunity |
gptkb:GitHub_Issues
newsletter Gitter chat |
| gptkbp:developer |
Biopython Project Contributors
|
| gptkbp:documentation |
https://biopython.org/wiki/Documentation
|
| gptkbp:firstReleased |
1999
|
| https://www.w3.org/2000/01/rdf-schema#label |
Biopython
|
| gptkbp:latestReleaseVersion |
1.83
|
| gptkbp:license |
gptkb:Biopython_License
|
| gptkbp:npmPackage |
biopython
|
| gptkbp:officialWebsite |
https://biopython.org/
|
| gptkbp:packageManager |
gptkb:PyPI
|
| gptkbp:platform |
gptkb:Windows
gptkb:macOS gptkb:Linux |
| gptkbp:provides |
sequence analysis tools
sequence alignment tools 3D structure analysis tools BLAST integration Bio.Align module for alignments Bio.AlignIO module for alignment input/output Bio.Application module for command-line tools Bio.Blast module for BLAST parsing Bio.Cluster module for clustering Bio.Data module for biological data Bio.Entrez module for NCBI access Bio.ExPASy module for ExPASy access Bio.FSSP module for FSSP files Bio.GA module for genetic algorithms Bio.Graphics module for visualization Bio.HMM module for hidden Markov models Bio.KDTree module for k-d tree data structure Bio.Medline module for Medline records Bio.Motif module for motif analysis Bio.Nexus module for Nexus file format Bio.PDB module for protein structures Bio.Pathway module for pathway analysis Bio.Phylo module for phylogenetics Bio.PopGen module for population genetics Bio.Restriction module for restriction analysis Bio.SCOP module for SCOP database Bio.Saf module for SAF files Bio.Seq module for sequence objects Bio.SeqFeature module for sequence features Bio.SeqIO module for sequence input/output Bio.SeqRecord module for sequence records Bio.Similarity module for similarity search Bio.SubsMat module for substitution matrices Bio.SwissProt module for Swiss-Prot files Bio.UniProt module for UniProt access Bio.Wise module for Wise2 integration Bio.bgzf module for BGZF files Bio.codonalign module for codon alignment Bio.pairwise2 module for pairwise alignment Bio.trie module for trie data structure BioSQL database interface BioSQL support FASTA file parser GenBank file parser NCBI Entrez API interface Swiss-Prot file parser interfaces to online bioinformatics resources parsers for bioinformatics file formats phylogenetics tools population genetics tools tools for working with biological sequences |
| gptkbp:relatedTo |
gptkb:BioPerl
gptkb:BioJava gptkb:BioRuby PySCeS scikit-bio |
| gptkbp:repository |
https://github.com/biopython/biopython
|
| gptkbp:usedFor |
computational biology
bioinformatics |
| gptkbp:writtenBy |
gptkb:Python
|
| gptkbp:bfsParent |
gptkb:Bioconductor_project
|
| gptkbp:bfsLayer |
7
|