Statements (115)
| Predicate | Object |
|---|---|
| gptkbp:instance_of |
gptkb:Library
|
| gptkbp:application |
gptkb:biotechnology
clinical trials data visualization drug discovery population genetics data mining biomedical research biostatistics comparative genomics sequence alignment network analysis phylogenetics health informatics gene expression analysis proteomics systems biology transcriptomics gene prediction genome analysis metagenomics protein structure prediction variant analysis epigenomics pathway analysis clinical genomics personal genomics environmental genomics agricultural genomics translational genomics microbiome analysis forensic genomics veterinary genomics machine learning in bioinformatics |
| gptkbp:available_at |
gptkb:CPAN
|
| gptkbp:community_support |
active
|
| gptkbp:contribution |
open source
|
| gptkbp:dependency |
Perl modules
|
| gptkbp:developed_by |
gptkb:Bioperl_community
|
| gptkbp:features |
gptkb:Non-Aligned_Movement
database access sequence analysis file format conversion web services integration |
| gptkbp:first_released |
gptkb:1999
|
| gptkbp:has_community |
Bioperl Git Hub
Bioperl IRC channel Bioperl mailing list |
| gptkbp:has_documentation |
available online
API reference User guides Bio Perl Wiki CPAN documentation |
| gptkbp:has_feature |
extensibility
user-friendly interface modular architecture cross-platform compatibility frequent updates extensive testing active development community integration with databases support for web services support for multiple file formats support for custom plugins rich set of modules support for alignment formats support for high-throughput data analysis support for metagenomics support for phylogenetic analysis support for population genetics support for proteomics support for sequence formats support for structural bioinformatics support for systems biology support for transcriptomics |
| gptkbp:has_version |
2.0.0
1.7.0 1.8.0 1.9.0 |
| https://www.w3.org/2000/01/rdf-schema#label |
Bio Perl
|
| gptkbp:installation |
gptkb:CPAN
|
| gptkbp:is_compatible_with |
gptkb:Bio_Java
gptkb:Bio_Python gptkb:Bio_Ruby |
| gptkbp:is_part_of |
gptkb:Open_Bioinformatics_Foundation
|
| gptkbp:is_used_by |
gptkb:researchers
data scientists geneticists bioinformaticians biologists |
| gptkbp:latest_version |
1.7.8
|
| gptkbp:license |
gptkb:GNU_General_Public_License
|
| gptkbp:platforms |
cross-platform
|
| gptkbp:programming_language |
gptkb:Perl
|
| gptkbp:provides |
tools for visualization
tools for alignment tools for data retrieval tools for sequence analysis |
| gptkbp:purpose |
bioinformatics
|
| gptkbp:release_date |
gptkb:1999
|
| gptkbp:repository |
gptkb:Git_Hub
|
| gptkbp:supports |
gptkb:EMBL
gptkb:Uni_Prot gptkb:BLAST gptkb:Gen_Bank |
| gptkbp:tutorials |
available online
|
| gptkbp:used_by |
gptkb:researchers
geneticists bioinformaticians biologists |
| gptkbp:used_for |
bioinformatics
|
| gptkbp:website |
bioperl.org
|
| gptkbp:written_in |
gptkb:Perl
|
| gptkbp:bfsParent |
gptkb:Newick
|
| gptkbp:bfsLayer |
5
|