BIDS-Microscopy

GPTKB entity

Statements (47)
Predicate Object
gptkbp:instanceOf data standard extension
gptkbp:appliesTo microscopy imaging data
gptkbp:compatibleWith gptkb:Bio-Formats
gptkb:OME-TIFF
gptkbp:enables data sharing
reproducible research
standardized data organization
gptkbp:fileExtension .csv
.json
.tif
.tiff
.jpg
.png
.tsv
.nii
.nii.gz
.ome.tiff
gptkbp:firstReleased 2021
gptkbp:hasFileType gptkb:illustrator
metadata
annotation
quality control
provenance
tabular data
sample metadata
segmentation mask
acquisition parameters
coordinate data
experiment metadata
instrument metadata
label map
processing pipeline
region of interest
sample description
staining protocol
subject metadata
https://www.w3.org/2000/01/rdf-schema#label BIDS-Microscopy
gptkbp:partOf gptkb:Brain_Imaging_Data_Structure
gptkbp:publishedBy gptkb:BIDS_community
gptkbp:specifies https://bids-specification.readthedocs.io/en/stable/05-modality-specific-files/10-microscopy.html
gptkbp:supports electron microscopy
light microscopy
multiplexed imaging
gptkbp:usedIn neuroscience research
biomedical imaging
gptkbp:bfsParent gptkb:Brain_Imaging_Data_Structure
gptkbp:bfsLayer 7