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gptkbp:instanceOf
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molecular dynamics software
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gptkbp:application
|
molecular dynamics
biomolecular simulations
protein-ligand binding
nucleic acid simulations
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gptkbp:citation
|
>20,000
Case, D.A. et al. (2022) AMBER 2022, University of California, San Francisco.
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gptkbp:component
|
gptkb:cpptraj
gptkb:parmed
gptkb:pmemd
gptkb:tleap
sander
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gptkbp:developer
|
gptkb:Tom_Cheatham
gptkb:Ross_Walker
gptkb:David_A._Case
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gptkbp:firstReleased
|
1979
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|
https://www.w3.org/2000/01/rdf-schema#label
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AMBER software
|
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gptkbp:includes
|
gptkb:AmberTools
analysis tools
force fields
|
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gptkbp:interface
|
gptkb:AmberTools
|
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gptkbp:latestReleaseVersion
|
gptkb:AMBER_22
2022
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gptkbp:license
|
proprietary
|
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gptkbp:operatingSystem
|
gptkb:Windows
gptkb:macOS
gptkb:Linux
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gptkbp:programmingLanguage
|
gptkb:Fortran
C
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gptkbp:relatedTo
|
gptkb:CHARMM
gptkb:NAMD
gptkb:GROMACS
gptkb:LAMMPS
|
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gptkbp:supportsFormat
|
gptkb:PDB
gptkb:NetCDF
AMBER topology format
|
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gptkbp:usedBy
|
pharmaceutical industry
academic researchers
|
|
gptkbp:usedFor
|
free energy calculations
molecular dynamics trajectories
force field development
|
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gptkbp:website
|
https://ambermd.org/
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gptkbp:bfsParent
|
gptkb:Generalized_Born_model
|
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gptkbp:bfsLayer
|
7
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