Triple
T9844978
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Denis Noble |
E239317
|
entity |
| Predicate | notableWork |
P4
|
FINISHED |
| Object |
From Genes to Systems: The Evolving Paradigm in Biology
"From Genes to Systems: The Evolving Paradigm in Biology" is a work by physiologist Denis Noble that argues for a shift from gene-centered views of life toward an integrative, systems-level understanding of biological organization and function.
|
E824760
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: From Genes to Systems: The Evolving Paradigm in Biology | Statement: [Denis Noble, notableWork, From Genes to Systems: The Evolving Paradigm in Biology]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: From Genes to Systems: The Evolving Paradigm in Biology Context triple: [Denis Noble, notableWork, From Genes to Systems: The Evolving Paradigm in Biology]
-
A.
The Future of Biology
"The Future of Biology" is an essay by David Lewis that explores how advances in biological science might reshape our understanding of life, mind, and philosophical questions about possibility and explanation.
-
B.
The Triple Helix: Gene, Organism, and Environment
The Triple Helix: Gene, Organism, and Environment is a book by evolutionary biologist Richard Lewontin that critiques genetic determinism and emphasizes the dynamic, reciprocal interactions among genes, organisms, and their environments in shaping biological traits.
-
C.
The Growth of Biological Thought
The Growth of Biological Thought is a landmark 1982 book by evolutionary biologist Ernst Mayr that traces the historical development and conceptual foundations of modern biology, especially evolutionary theory and systematics.
-
D.
Molecular Systems Biology
Molecular Systems Biology is a peer-reviewed scientific journal focusing on systems-level analysis of molecular and cellular processes in biology.
-
E.
Biological Systems Science
Biological Systems Science is a research subprogram that investigates the structure, function, and interactions of living systems, often using systems biology and omics approaches to understand and predict biological behavior.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: From Genes to Systems: The Evolving Paradigm in Biology Triple: [Denis Noble, notableWork, From Genes to Systems: The Evolving Paradigm in Biology]
Generated description
"From Genes to Systems: The Evolving Paradigm in Biology" is a work by physiologist Denis Noble that argues for a shift from gene-centered views of life toward an integrative, systems-level understanding of biological organization and function.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: From Genes to Systems: The Evolving Paradigm in Biology Target entity description: "From Genes to Systems: The Evolving Paradigm in Biology" is a work by physiologist Denis Noble that argues for a shift from gene-centered views of life toward an integrative, systems-level understanding of biological organization and function.
-
A.
The Future of Biology
"The Future of Biology" is an essay by David Lewis that explores how advances in biological science might reshape our understanding of life, mind, and philosophical questions about possibility and explanation.
-
B.
The Triple Helix: Gene, Organism, and Environment
The Triple Helix: Gene, Organism, and Environment is a book by evolutionary biologist Richard Lewontin that critiques genetic determinism and emphasizes the dynamic, reciprocal interactions among genes, organisms, and their environments in shaping biological traits.
-
C.
The Growth of Biological Thought
The Growth of Biological Thought is a landmark 1982 book by evolutionary biologist Ernst Mayr that traces the historical development and conceptual foundations of modern biology, especially evolutionary theory and systematics.
-
D.
Molecular Systems Biology
Molecular Systems Biology is a peer-reviewed scientific journal focusing on systems-level analysis of molecular and cellular processes in biology.
-
E.
Biological Systems Science
Biological Systems Science is a research subprogram that investigates the structure, function, and interactions of living systems, often using systems biology and omics approaches to understand and predict biological behavior.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69ca84e3f0c48190ada72a65ebd50efd |
completed | March 30, 2026, 2:12 p.m. |
| NER | Named-entity recognition | batch_69cdb35ff7848190a8a717773d8654b9 |
completed | April 2, 2026, 12:08 a.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69d1d5dda4b0819092703270e87bee5a |
completed | April 5, 2026, 3:24 a.m. |
| NEDg | Description generation | batch_69d1d6815e28819081788393cda63bc0 |
completed | April 5, 2026, 3:26 a.m. |
| NED2 | Entity disambiguation (via description) | batch_69d1d75210f4819096ee05a8b870581e |
completed | April 5, 2026, 3:30 a.m. |
Created at: March 30, 2026, 8:33 p.m.