Triple

T6098293
Position Surface form Disambiguated ID Type / Status
Subject Entrez system E135930 entity
Predicate hasPart P35 FINISHED
Object ClinVar database
The ClinVar database is a public archive that aggregates information about the clinical significance of genetic variants and their relationships to human health.
E569124 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: ClinVar database | Statement: [Entrez system, hasPart, ClinVar database]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: ClinVar database
Context triple: [Entrez system, hasPart, ClinVar database]
  • A. 23andMe
    23andMe is a personal genomics and biotechnology company best known for providing direct-to-consumer DNA testing and ancestry analysis services.
  • B. Diagnostics and Genomics
    Diagnostics and Genomics is a business segment focused on providing advanced tools and solutions for molecular diagnostics, genetic analysis, and related clinical and research applications.
  • C. Genetic and Rare Diseases Information Center
    The Genetic and Rare Diseases Information Center is a U.S. government resource that provides reliable, up-to-date information and support to patients, families, and healthcare professionals about genetic and rare conditions.
  • D. American College of Medical Genetics and Genomics
    The American College of Medical Genetics and Genomics is a professional organization that advances the practice and standards of medical genetics and genomics through education, policy, and clinical guidelines for healthcare providers.
  • E. Rare Diseases Registry Program
    The Rare Diseases Registry Program is an initiative that helps develop and maintain patient registries to advance research, understanding, and treatment of rare diseases.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: ClinVar database
Triple: [Entrez system, hasPart, ClinVar database]
Generated description
The ClinVar database is a public archive that aggregates information about the clinical significance of genetic variants and their relationships to human health.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: ClinVar database
Target entity description: The ClinVar database is a public archive that aggregates information about the clinical significance of genetic variants and their relationships to human health.
  • A. 23andMe
    23andMe is a personal genomics and biotechnology company best known for providing direct-to-consumer DNA testing and ancestry analysis services.
  • B. Diagnostics and Genomics
    Diagnostics and Genomics is a business segment focused on providing advanced tools and solutions for molecular diagnostics, genetic analysis, and related clinical and research applications.
  • C. Genetic and Rare Diseases Information Center
    The Genetic and Rare Diseases Information Center is a U.S. government resource that provides reliable, up-to-date information and support to patients, families, and healthcare professionals about genetic and rare conditions.
  • D. American College of Medical Genetics and Genomics
    The American College of Medical Genetics and Genomics is a professional organization that advances the practice and standards of medical genetics and genomics through education, policy, and clinical guidelines for healthcare providers.
  • E. Rare Diseases Registry Program
    The Rare Diseases Registry Program is an initiative that helps develop and maintain patient registries to advance research, understanding, and treatment of rare diseases.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69c0087cd3c48190b459848c72d84eb1 completed March 22, 2026, 3:19 p.m.
NER Named-entity recognition batch_69c05a9a02888190ac201acd14c3fc31 completed March 22, 2026, 9:09 p.m.
NED1 Entity disambiguation (via context triple) batch_69c1254365708190b8feb95dfb2b730d completed March 23, 2026, 11:34 a.m.
NEDg Description generation batch_69c125d888cc819092b765d47f1d9f9f completed March 23, 2026, 11:36 a.m.
NED2 Entity disambiguation (via description) batch_69c126f308988190ab6cb6c79ea12877 completed March 23, 2026, 11:41 a.m.
Created at: March 22, 2026, 4:12 p.m.