Triple
T6098293
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Entrez system |
E135930
|
entity |
| Predicate | hasPart |
P35
|
FINISHED |
| Object |
ClinVar database
The ClinVar database is a public archive that aggregates information about the clinical significance of genetic variants and their relationships to human health.
|
E569124
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: ClinVar database | Statement: [Entrez system, hasPart, ClinVar database]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: ClinVar database Context triple: [Entrez system, hasPart, ClinVar database]
-
A.
23andMe
23andMe is a personal genomics and biotechnology company best known for providing direct-to-consumer DNA testing and ancestry analysis services.
-
B.
Diagnostics and Genomics
Diagnostics and Genomics is a business segment focused on providing advanced tools and solutions for molecular diagnostics, genetic analysis, and related clinical and research applications.
-
C.
Genetic and Rare Diseases Information Center
The Genetic and Rare Diseases Information Center is a U.S. government resource that provides reliable, up-to-date information and support to patients, families, and healthcare professionals about genetic and rare conditions.
-
D.
American College of Medical Genetics and Genomics
The American College of Medical Genetics and Genomics is a professional organization that advances the practice and standards of medical genetics and genomics through education, policy, and clinical guidelines for healthcare providers.
-
E.
Rare Diseases Registry Program
The Rare Diseases Registry Program is an initiative that helps develop and maintain patient registries to advance research, understanding, and treatment of rare diseases.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: ClinVar database Triple: [Entrez system, hasPart, ClinVar database]
Generated description
The ClinVar database is a public archive that aggregates information about the clinical significance of genetic variants and their relationships to human health.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: ClinVar database Target entity description: The ClinVar database is a public archive that aggregates information about the clinical significance of genetic variants and their relationships to human health.
-
A.
23andMe
23andMe is a personal genomics and biotechnology company best known for providing direct-to-consumer DNA testing and ancestry analysis services.
-
B.
Diagnostics and Genomics
Diagnostics and Genomics is a business segment focused on providing advanced tools and solutions for molecular diagnostics, genetic analysis, and related clinical and research applications.
-
C.
Genetic and Rare Diseases Information Center
The Genetic and Rare Diseases Information Center is a U.S. government resource that provides reliable, up-to-date information and support to patients, families, and healthcare professionals about genetic and rare conditions.
-
D.
American College of Medical Genetics and Genomics
The American College of Medical Genetics and Genomics is a professional organization that advances the practice and standards of medical genetics and genomics through education, policy, and clinical guidelines for healthcare providers.
-
E.
Rare Diseases Registry Program
The Rare Diseases Registry Program is an initiative that helps develop and maintain patient registries to advance research, understanding, and treatment of rare diseases.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c0087cd3c48190b459848c72d84eb1 |
completed | March 22, 2026, 3:19 p.m. |
| NER | Named-entity recognition | batch_69c05a9a02888190ac201acd14c3fc31 |
completed | March 22, 2026, 9:09 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69c1254365708190b8feb95dfb2b730d |
completed | March 23, 2026, 11:34 a.m. |
| NEDg | Description generation | batch_69c125d888cc819092b765d47f1d9f9f |
completed | March 23, 2026, 11:36 a.m. |
| NED2 | Entity disambiguation (via description) | batch_69c126f308988190ab6cb6c79ea12877 |
completed | March 23, 2026, 11:41 a.m. |
Created at: March 22, 2026, 4:12 p.m.