Triple
T6065058
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | SMN2 |
E135135
|
entity |
| Predicate | encodes |
P14248
|
FINISHED |
| Object | survival motor neuron protein |
E133680
|
NE FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: survival motor neuron protein | Statement: [SMN2, encodes, survival motor neuron protein]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: survival motor neuron protein Context triple: [SMN2, encodes, survival motor neuron protein]
-
A.
survival motor neuron protein
chosen
Survival motor neuron protein is an essential cellular protein required for the maintenance and function of motor neurons, whose deficiency leads to spinal muscular atrophy.
-
B.
SOD1
SOD1 is a gene encoding the antioxidant enzyme superoxide dismutase 1, whose mutations are a major known cause of familial amyotrophic lateral sclerosis (ALS).
-
C.
SMN complex
The SMN complex is a multiprotein assembly crucial for the biogenesis of small nuclear ribonucleoproteins (snRNPs) and proper pre-mRNA splicing, with key roles in motor neuron survival.
-
D.
SMN2
SMN2 is a human gene that produces a backup form of survival motor neuron protein and is a key therapeutic target in spinal muscular atrophy.
-
E.
spinal muscular atrophy
Spinal muscular atrophy is a genetic neuromuscular disorder characterized by progressive muscle weakness and atrophy due to degeneration of motor neurons in the spinal cord.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c00878d06881909ee78e88913bf890 |
completed | March 22, 2026, 3:19 p.m. |
| NER | Named-entity recognition | batch_69c05723c91c819090b4d4672e72f9f3 |
completed | March 22, 2026, 8:54 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_69c11d23dca8819080702ca0f05df5dd |
completed | March 23, 2026, 10:59 a.m. |
Created at: March 22, 2026, 4:10 p.m.