Triple
T6004706
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Survival motor neuron protein |
E133680
|
entity |
| Predicate | orthologIn |
P51609
|
FINISHED |
| Object | Mus musculus |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Mus musculus | Statement: [Survival motor neuron protein, orthologIn, Mus musculus]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: orthologIn Context triple: [Survival motor neuron protein, orthologIn, Mus musculus]
-
A.
hasOrthologsWith
chosen
Indicates that two genes or proteins in different species are orthologous, meaning they originated from a common ancestral gene and typically retain similar functions.
-
B.
percentageHumanGenesWithOrthologs
Indicates the proportion of human genes that have corresponding orthologous genes in another species or set of species.
-
C.
hasSynapomorphy
Indicates that two or more taxa share a derived character state inherited from their most recent common ancestor, distinguishing that clade from others.
-
D.
relatedSpeciesOrVariant
Indicates that one species or biological variant is taxonomically or genetically related to another.
-
E.
cognateOf
Indicates that two linguistic forms share a common historical origin, typically descending from the same ancestral word.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c00872444c8190bfaf1739dcec765c |
completed | March 22, 2026, 3:19 p.m. |
| NER | Named-entity recognition | batch_69c04f10d18081908c351170b7f58d3d |
completed | March 22, 2026, 8:20 p.m. |
| PD | Predicate disambiguation | batch_69c049e3316c819087ea635fa7ee8472 |
completed | March 22, 2026, 7:58 p.m. |
Created at: March 22, 2026, 4:06 p.m.