Triple
T6004704
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Survival motor neuron protein |
E133680
|
entity |
| Predicate | postTranslationalModification |
P43320
|
FINISHED |
| Object | phosphorylation |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: phosphorylation | Statement: [Survival motor neuron protein, postTranslationalModification, phosphorylation]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: postTranslationalModification Context triple: [Survival motor neuron protein, postTranslationalModification, phosphorylation]
-
A.
laterModification
Indicates that one entity is a modification or revision that occurs after another in time.
-
B.
modification
chosen
Indicates a change made to an existing entity, altering its properties, structure, or state from a prior version.
-
C.
leafModification
Indicates a relationship where an entity undergoes or causes a change in the structure, form, or characteristics of a leaf.
-
D.
hasAminoAcidChange
Indicates that an entity (such as a protein or gene variant) involves or results in a specific change from one amino acid to another in its sequence.
-
E.
isMetabolizedBy
Indicates that a substance is biochemically broken down or transformed through metabolic processes carried out by a specified organism, cell type, or enzyme system.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69c00872444c8190bfaf1739dcec765c |
completed | March 22, 2026, 3:19 p.m. |
| NER | Named-entity recognition | batch_69c04f10d18081908c351170b7f58d3d |
completed | March 22, 2026, 8:20 p.m. |
| PD | Predicate disambiguation | batch_69c049e3316c819087ea635fa7ee8472 |
completed | March 22, 2026, 7:58 p.m. |
Created at: March 22, 2026, 4:06 p.m.