Triple

T5114823
Position Surface form Disambiguated ID Type / Status
Subject APOE ε4 allele E115305 entity
Predicate differsFrom P278 FINISHED
Object APOE ε3 allele
The APOE ε3 allele is the most common and generally considered the “neutral” variant of the apolipoprotein E gene, associated with average risk for Alzheimer’s disease and typical lipid metabolism compared to other APOE alleles.
E494101 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: APOE ε3 allele | Statement: [APOE ε4 allele, differsFrom, APOE ε3 allele]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: APOE ε3 allele
Context triple: [APOE ε4 allele, differsFrom, APOE ε3 allele]
  • A. APOE ε4 allele
    The APOE ε4 allele is a genetic variant of the apolipoprotein E gene that significantly increases an individual's susceptibility to late-onset Alzheimer's disease.
  • B. CYP3A4
    CYP3A4 is a major human liver and intestinal enzyme of the cytochrome P450 family responsible for metabolizing a wide range of drugs and xenobiotics.
  • C. AP3A
    AP3A is a scholarly journal series publishing peer-reviewed archaeological research under the American Anthropological Association.
  • D. Multi-Ethnic Study of Atherosclerosis
    The Multi-Ethnic Study of Atherosclerosis is a long-term, population-based medical research study that investigates the prevalence, progression, and risk factors of cardiovascular disease across diverse ethnic groups in the United States.
  • E. CD38
    CD38 is a cell surface glycoprotein with ectoenzyme and receptor functions, highly expressed on plasma cells and targeted in therapies for multiple myeloma and other hematologic malignancies.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: APOE ε3 allele
Triple: [APOE ε4 allele, differsFrom, APOE ε3 allele]
Generated description
The APOE ε3 allele is the most common and generally considered the “neutral” variant of the apolipoprotein E gene, associated with average risk for Alzheimer’s disease and typical lipid metabolism compared to other APOE alleles.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: APOE ε3 allele
Target entity description: The APOE ε3 allele is the most common and generally considered the “neutral” variant of the apolipoprotein E gene, associated with average risk for Alzheimer’s disease and typical lipid metabolism compared to other APOE alleles.
  • A. APOE ε4 allele
    The APOE ε4 allele is a genetic variant of the apolipoprotein E gene that significantly increases an individual's susceptibility to late-onset Alzheimer's disease.
  • B. CYP3A4
    CYP3A4 is a major human liver and intestinal enzyme of the cytochrome P450 family responsible for metabolizing a wide range of drugs and xenobiotics.
  • C. AP3A
    AP3A is a scholarly journal series publishing peer-reviewed archaeological research under the American Anthropological Association.
  • D. Multi-Ethnic Study of Atherosclerosis
    The Multi-Ethnic Study of Atherosclerosis is a long-term, population-based medical research study that investigates the prevalence, progression, and risk factors of cardiovascular disease across diverse ethnic groups in the United States.
  • E. CD38
    CD38 is a cell surface glycoprotein with ectoenzyme and receptor functions, highly expressed on plasma cells and targeted in therapies for multiple myeloma and other hematologic malignancies.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69bd4441d1648190a54a533895041987 completed March 20, 2026, 12:57 p.m.
NER Named-entity recognition batch_69bd75ce6044819094166aebf0688665 completed March 20, 2026, 4:29 p.m.
NED1 Entity disambiguation (via context triple) batch_69bebaadfaac8190aa0407196e5c4c20 completed March 21, 2026, 3:35 p.m.
NEDg Description generation batch_69bebb1a4370819085bcbe73a0b8c68e completed March 21, 2026, 3:36 p.m.
NED2 Entity disambiguation (via description) batch_69bebcf63784819097be14bb7dcbf4d9 completed March 21, 2026, 3:44 p.m.
Created at: March 20, 2026, 1:41 p.m.