Triple

T4464671
Position Surface form Disambiguated ID Type / Status
Subject Graduate School of Information Science and Technology, Osaka University E98345 entity
Predicate offersProgram P178 FINISHED
Object Bioinformatic Engineering
Bioinformatic Engineering is an interdisciplinary field that applies computational, mathematical, and engineering approaches to analyze biological data and solve complex problems in life sciences and medicine.
E441473 NE FINISHED

How this triple was built (4 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Bioinformatic Engineering | Statement: [Graduate School of Information Science and Technology, Osaka University, offersProgram, Bioinformatic Engineering]
NED1 Entity disambiguation (via context triple) gpt-5-mini-2025-08-07
Target entity: Bioinformatic Engineering
Context triple: [Graduate School of Information Science and Technology, Osaka University, offersProgram, Bioinformatic Engineering]
  • A. Department of Computational Biology and Medical Sciences
    The Department of Computational Biology and Medical Sciences is an academic unit specializing in the integration of computational methods with biological and medical research to advance understanding of complex life and health systems.
  • B. The Science of Computing
    "The Science of Computing" is a foundational work by Peter J. Denning that explores the principles, theory, and practice underlying computer science as a scientific discipline.
  • C. Center for Applied Genomics
    The Center for Applied Genomics is a major pediatric genomics research institute specializing in identifying genetic factors underlying childhood diseases and advancing precision medicine.
  • D. Bioconductor
    Bioconductor is an open-source project that provides R packages and tools for the analysis and comprehension of high-throughput genomic and biological data.
  • E. Master of Science in Bioinformatics (information sciences concentration)
    The Master of Science in Bioinformatics (information sciences concentration) is a graduate program that trains students to apply computational, data science, and information management methods to biological and biomedical data analysis.
  • F. None of above. chosen
  • G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Bioinformatic Engineering
Triple: [Graduate School of Information Science and Technology, Osaka University, offersProgram, Bioinformatic Engineering]
Generated description
Bioinformatic Engineering is an interdisciplinary field that applies computational, mathematical, and engineering approaches to analyze biological data and solve complex problems in life sciences and medicine.
NED2 Entity disambiguation (via description) gpt-5-mini-2025-08-07
Target entity: Bioinformatic Engineering
Target entity description: Bioinformatic Engineering is an interdisciplinary field that applies computational, mathematical, and engineering approaches to analyze biological data and solve complex problems in life sciences and medicine.
  • A. Department of Computational Biology and Medical Sciences
    The Department of Computational Biology and Medical Sciences is an academic unit specializing in the integration of computational methods with biological and medical research to advance understanding of complex life and health systems.
  • B. The Science of Computing
    "The Science of Computing" is a foundational work by Peter J. Denning that explores the principles, theory, and practice underlying computer science as a scientific discipline.
  • C. Center for Applied Genomics
    The Center for Applied Genomics is a major pediatric genomics research institute specializing in identifying genetic factors underlying childhood diseases and advancing precision medicine.
  • D. Bioconductor
    Bioconductor is an open-source project that provides R packages and tools for the analysis and comprehension of high-throughput genomic and biological data.
  • E. Master of Science in Bioinformatics (information sciences concentration)
    The Master of Science in Bioinformatics (information sciences concentration) is a graduate program that trains students to apply computational, data science, and information management methods to biological and biomedical data analysis.
  • F. None of above. chosen

Provenance (5 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69b3454a7c608190944f5455c8031d73 completed March 12, 2026, 10:59 p.m.
NER Named-entity recognition batch_69b35697937c8190b91f72d9e4f945f6 completed March 13, 2026, 12:13 a.m.
NED1 Entity disambiguation (via context triple) batch_69b6285164b081908f144e74ae3a1be8 completed March 15, 2026, 3:32 a.m.
NEDg Description generation batch_69b62954b77c8190968f844514656415 completed March 15, 2026, 3:36 a.m.
NED2 Entity disambiguation (via description) batch_69b62a0cd92c8190a9eee2a9d73fb679 completed March 15, 2026, 3:39 a.m.
Created at: March 12, 2026, 11:34 p.m.