Triple

T25947674
Position Surface form Disambiguated ID Type / Status
Subject Gene Ontology E653881 entity
Predicate hasAnnotationFormat P107278 FINISHED
Object Gene Association File
The Gene Association File is a standardized tab-delimited format used to record and exchange gene-to-Gene Ontology term annotations across different databases and organisms.
 E1701865 NE FINISHED

How this triple was built (3 steps)

Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.

NER Named-entity recognition gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Gene Association File | Statement: [Gene Ontology, hasAnnotationFormat, Gene Association File]
NEDg Description generation gpt-5.1
Instruction
Generate a one-sentence description of the target entity. 
You are given a context triple in the form (subject, predicate, object), where the object is the target entity. 
# Instructions
Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. 
Avoid repeating the information from the triple, unless really essential.
# Response Format
Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Gene Association File
Triple: [Gene Ontology, hasAnnotationFormat, Gene Association File]
Generated description
The Gene Association File is a standardized tab-delimited format used to record and exchange gene-to-Gene Ontology term annotations across different databases and organisms.
PD Predicate disambiguation gpt-5-mini-2025-08-07 
Target predicate: hasAnnotationFormat
Context triple: [Gene Ontology, hasAnnotationFormat, Gene Association File]
  • A. hasFormatElement
    Indicates that one entity includes, is composed of, or is associated with a specific structural or formatting component of its overall format.
  • B. hasFormatSpecification chosen
    Indicates that something is associated with a particular format definition or specification that describes how it should be structured or represented.
  • C. hasConfigurationFormat
    Indicates that an entity uses or is associated with a specific configuration format for its settings or parameters.
  • D. hasMatchFormat
    Indicates that something (such as a game, event, or competition) is conducted according to a specified match format or structure.
  • E. hasFormatCurrent
    Indicates that an entity is available or expressed in the currently used or most up-to-date format.
  • F. None of above.

Provenance (6 batches)

The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.

Step Stage Batch ID Status When
creating Elicitation batch_69e7ab40ac788190a771bc499eb1ae5f completed April 21, 2026, 4:52 p.m.
NER Named-entity recognition batch_69f661b58ac48190907b6c6e9ccc2c59 completed May 2, 2026, 8:42 p.m.
NED1 Entity disambiguation (via context triple) batch_6a10ece4d2008190b90b1354c8f87edf completed May 22, 2026, 11:55 p.m.
NEDg Description generation batch_6a10f0cbb3d48190ac16d04f9510ac6d completed May 23, 2026, 12:11 a.m.
NED2 Entity disambiguation (via description) batch_6a10f15441048190a5e1285220fcea3d completed May 23, 2026, 12:14 a.m.
PD Predicate disambiguation batch_69f660eea4648190b0d5e24293607813 completed May 2, 2026, 8:39 p.m.
Created at: April 22, 2026, 8:43 a.m.