Triple
T23472971
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | GenBank |
E570176
|
entity |
| Predicate | collaboratesWith |
P37
|
FINISHED |
| Object |
European Nucleotide Archive
The European Nucleotide Archive is a comprehensive public repository maintained by the European Bioinformatics Institute that stores and provides access to nucleotide sequence data from around the world.
|
E1588315
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: European Nucleotide Archive | Statement: [GenBank, collaboratesWith, European Nucleotide Archive]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: European Nucleotide Archive Context triple: [GenBank, collaboratesWith, European Nucleotide Archive]
-
A.
GenBank
GenBank is a comprehensive public database of nucleotide sequences and their associated annotation, widely used as a primary resource for genetic and genomic research.
-
B.
NCBI databases
NCBI databases are a collection of publicly accessible biological data resources, including nucleotide and protein sequences, genomes, and literature, maintained by the U.S. National Center for Biotechnology Information.
-
C.
European Bioinformatics Institute
The European Bioinformatics Institute (EMBL-EBI) is a major international research center that develops and hosts biological data resources and tools to support life science research worldwide.
-
D.
National Center for Biotechnology Information
The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
-
E.
Ensembl
Ensembl is a comprehensive genome annotation and browsing platform that provides detailed, regularly updated genomic data for a wide range of species.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: European Nucleotide Archive Triple: [GenBank, collaboratesWith, European Nucleotide Archive]
Generated description
The European Nucleotide Archive is a comprehensive public repository maintained by the European Bioinformatics Institute that stores and provides access to nucleotide sequence data from around the world.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: European Nucleotide Archive Target entity description: The European Nucleotide Archive is a comprehensive public repository maintained by the European Bioinformatics Institute that stores and provides access to nucleotide sequence data from around the world.
-
A.
GenBank
GenBank is a comprehensive public database of nucleotide sequences and their associated annotation, widely used as a primary resource for genetic and genomic research.
-
B.
NCBI databases
NCBI databases are a collection of publicly accessible biological data resources, including nucleotide and protein sequences, genomes, and literature, maintained by the U.S. National Center for Biotechnology Information.
-
C.
European Bioinformatics Institute
The European Bioinformatics Institute (EMBL-EBI) is a major international research center that develops and hosts biological data resources and tools to support life science research worldwide.
-
D.
National Center for Biotechnology Information
The National Center for Biotechnology Information (NCBI) is a U.S. government bioinformatics institution that develops and hosts major biological databases and tools for biomedical research.
-
E.
Ensembl
Ensembl is a comprehensive genome annotation and browsing platform that provides detailed, regularly updated genomic data for a wide range of species.
- F. None of above. chosen
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e245af8a88819084f2704f6d265a92 |
completed | April 17, 2026, 2:37 p.m. |
| NER | Named-entity recognition | batch_69f1a70244208190bbd8f58ac16d4399 |
completed | April 29, 2026, 6:36 a.m. |
| NED1 | Entity disambiguation (via context triple) | batch_6a0c82604cc08190b36c6b9636b6bf42 |
completed | May 19, 2026, 3:31 p.m. |
| NEDg | Description generation | batch_6a0ca6f06a348190bfdba0452077f45b |
completed | May 19, 2026, 6:07 p.m. |
| NED2 | Entity disambiguation (via description) | batch_6a0ca7c5176c81908221307bb50ff4ed |
completed | May 19, 2026, 6:11 p.m. |
Created at: April 17, 2026, 5:57 p.m.