Triple
T22693256
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | TDP-43 proteinopathy |
E561103
|
entity |
| Predicate | hasRiskFactor |
P8576
|
FINISHED |
| Object | C9orf72 hexanucleotide repeat expansion |
—
|
NE NERFINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: C9orf72 hexanucleotide repeat expansion | Statement: [TDP-43 proteinopathy, hasRiskFactor, C9orf72 hexanucleotide repeat expansion]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: C9orf72 hexanucleotide repeat expansion Context triple: [TDP-43 proteinopathy, hasRiskFactor, C9orf72 hexanucleotide repeat expansion]
-
A.
C9orf72
chosen
C9orf72 is a human gene whose hexanucleotide repeat expansions are the most common known genetic cause of amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD).
-
B.
TDP-43 proteinopathy
TDP-43 proteinopathy is a neurodegenerative condition characterized by abnormal aggregation and mislocalization of the TDP-43 protein, commonly implicated in disorders such as amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD).
-
C.
SMN2
SMN2 is a human gene that produces a backup form of survival motor neuron protein and is a key therapeutic target in spinal muscular atrophy.
-
D.
SOD1
SOD1 is a gene encoding the antioxidant enzyme superoxide dismutase 1, whose mutations are a major known cause of familial amyotrophic lateral sclerosis (ALS).
-
E.
The Long Reach of the Gene
"The Long Reach of the Gene" is a chapter in Richard Dawkins' influential book *The Selfish Gene* that explores how genes exert effects beyond the bodies they inhabit, shaping behavior and even aspects of the environment to enhance their own propagation.
- F. None of above.
- G. Unsure - the case is ambiguous/there is not enough information to decide.
Provenance (2 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2454d71b48190a1f80af9f82b6fcf |
completed | April 17, 2026, 2:35 p.m. |
| NER | Named-entity recognition | batch_69f1789c6ae481908975b7d27e7624ac |
completed | April 29, 2026, 3:18 a.m. |
Created at: April 17, 2026, 3:13 p.m.