Triple
T22690221
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | glycinamide ribonucleotide formyltransferase |
E561031
|
entity |
| Predicate | catalyzesReaction |
P79101
|
FINISHED |
| Object | formylation of glycinamide ribonucleotide to formylglycinamide ribonucleotide |
—
|
LITERAL FINISHED |
How this triple was built (2 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: formylation of glycinamide ribonucleotide to formylglycinamide ribonucleotide | Statement: [glycinamide ribonucleotide formyltransferase, catalyzesReaction, formylation of glycinamide ribonucleotide to formylglycinamide ribonucleotide]
PD
Predicate disambiguation
gpt-5-mini-2025-08-07
Target predicate: catalyzesReaction Context triple: [glycinamide ribonucleotide formyltransferase, catalyzesReaction, formylation of glycinamide ribonucleotide to formylglycinamide ribonucleotide]
-
A.
ringReaction
Indicates that one entity performs or undergoes a reaction involving a chemical ring structure in relation to another entity.
-
B.
enzymeType
Indicates the specific class or category of enzyme associated with an entity or reaction.
-
C.
catalyst
chosen
Indicates that one entity facilitates or accelerates a process, reaction, or change involving another entity without itself being consumed or fundamentally altered.
-
D.
sideReaction
Indicates that one reaction occurs as an unintended or secondary process alongside a primary reaction.
-
E.
reactant
Indicates that an entity participates as a starting material or input substance in a chemical or reactive process.
- F. None of above.
Provenance (3 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69e2454d71b48190a1f80af9f82b6fcf |
completed | April 17, 2026, 2:35 p.m. |
| NER | Named-entity recognition | batch_69f1789a1fd08190bce5fa0babe695d3 |
completed | April 29, 2026, 3:18 a.m. |
| PD | Predicate disambiguation | batch_69ee62b2259c819091ed1387a748b9f3 |
completed | April 26, 2026, 7:08 p.m. |
Created at: April 17, 2026, 3:13 p.m.