Triple
T19773014
| Position | Surface form | Disambiguated ID | Type / Status |
|---|---|---|---|
| Subject | Prevnar 13 |
E474933
|
entity |
| Predicate | targetPathogen |
P51612
|
FINISHED |
| Object |
Streptococcus pneumoniae
Streptococcus pneumoniae is a Gram-positive bacterial pathogen that commonly colonizes the human respiratory tract and is a leading cause of pneumonia, meningitis, and other invasive infections worldwide.
|
E928069
|
NE FINISHED |
How this triple was built (4 steps)
Every LLM step that produced this triple, in pipeline order — named-entity classification, the disambiguation choices (the exact options shown, with the pick highlighted), and the generated description. The batch + timestamp of each is in the Provenance table below.
NER
Named-entity recognition
gpt-5-mini
Instruction
Given a phrase, classify it is english named entity (e.g., persons, organizations, works of art) in Latin script, or not (e.g., literals, dates, URLs, verbose phrases). For disambiguation, the statement where the phrase occurs as object is also given. Please return a JSON object with `phrase` (string, the phrase being analyzed) and `is_ne` (boolean, indicating whether the phrase is a Named Entity).
Input
Phrase: Streptococcus pneumoniae | Statement: [Prevnar 13, targetPathogen, Streptococcus pneumoniae]
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Streptococcus pneumoniae Context triple: [Prevnar 13, targetPathogen, Streptococcus pneumoniae]
-
A.
Neisseria meningitidis
Neisseria meningitidis is a Gram-negative bacterium that commonly colonizes the human nasopharynx and is a leading cause of bacterial meningitis and septicemia worldwide.
-
B.
Streptococcus
Streptococcus is a genus of Gram-positive, often chain-forming bacteria that includes many species significant as human pathogens, such as those causing strep throat, pneumonia, and meningitis.
-
C.
Haemophilus
Haemophilus is a genus of small, Gram-negative bacteria that includes species responsible for respiratory tract infections and serious invasive diseases in humans.
-
D.
Moraxella
Moraxella is a genus of Gram-negative bacteria that commonly colonize the mucosal surfaces of humans and animals, with some species acting as important respiratory pathogens.
-
E.
Klebsiella
Klebsiella is a genus of Gram-negative bacteria that includes important opportunistic human pathogens commonly associated with hospital-acquired infections such as pneumonia, urinary tract infections, and sepsis.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NEDg
Description generation
gpt-5.1
Instruction
Generate a one-sentence description of the target entity. You are given a context triple in the form (subject, predicate, object), where the object is the target entity. # Instructions Use the triple to infer relevant information about the entity. Describe the entity based on what is most defining, well-known. Avoid repeating the information from the triple, unless really essential. # Response Format Return only the sentence: "Description: [one-sentence description of the target entity]"
Input
Entity: Streptococcus pneumoniae Triple: [Prevnar 13, targetPathogen, Streptococcus pneumoniae]
Generated description
Streptococcus pneumoniae is a Gram-positive bacterial pathogen that commonly colonizes the human respiratory tract and is a leading cause of pneumonia, meningitis, and other invasive infections worldwide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Streptococcus pneumoniae Target entity description: Streptococcus pneumoniae is a Gram-positive bacterial pathogen that commonly colonizes the human respiratory tract and is a leading cause of pneumonia, meningitis, and other invasive infections worldwide.
-
A.
Neisseria meningitidis
Neisseria meningitidis is a Gram-negative bacterium that commonly colonizes the human nasopharynx and is a leading cause of bacterial meningitis and septicemia worldwide.
-
B.
Streptococcus
chosen
Streptococcus is a genus of Gram-positive, often chain-forming bacteria that includes many species significant as human pathogens, such as those causing strep throat, pneumonia, and meningitis.
-
C.
Haemophilus
Haemophilus is a genus of small, Gram-negative bacteria that includes species responsible for respiratory tract infections and serious invasive diseases in humans.
-
D.
Moraxella
Moraxella is a genus of Gram-negative bacteria that commonly colonize the mucosal surfaces of humans and animals, with some species acting as important respiratory pathogens.
-
E.
Klebsiella
Klebsiella is a genus of Gram-negative bacteria that includes important opportunistic human pathogens commonly associated with hospital-acquired infections such as pneumonia, urinary tract infections, and sepsis.
- F. None of above.
Provenance (5 batches)
The batch behind each pipeline step, in order, with when it ran. Timestamps are batch-level — stages were processed in waves, so the object chain (NER → NED1 → NEDg → NED2) reads in order, but predicate / elicitation batches can sit in a different wave.
| Step | Stage | Batch ID | Status | When |
|---|---|---|---|---|
| creating | Elicitation | batch_69d8e51a43a08190956bc6df13c91a77 |
completed | April 10, 2026, 11:55 a.m. |
| NER | Named-entity recognition | batch_69e6535e450c8190a2628245ae0d0bd3 |
completed | April 20, 2026, 4:25 p.m. |
| NED1 | Entity disambiguation (via context triple) | batch_6a07c4f4618481908fafb84937c2143f |
completed | May 16, 2026, 1:14 a.m. |
| NEDg | Description generation | batch_6a07c628176481908e636e80445facbc |
completed | May 16, 2026, 1:19 a.m. |
| NED2 | Entity disambiguation (via description) | batch_6a07c69e228c8190a3f5b0dfc2c3a829 |
completed | May 16, 2026, 1:21 a.m. |
Created at: April 10, 2026, 1:48 p.m.