GEO Profiles
E569122
GEO Profiles is a component of NCBI’s Gene Expression Omnibus that provides gene-centered views of expression data across multiple experiments and conditions.
All labels observed (1)
| Label | Occurrences |
|---|---|
| GEO Profiles canonical | 1 |
How this entity was disambiguated
This entity first appeared as the object of triple T6098288 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: GEO Profiles Context triple: [Entrez system, hasPart, GEO Profiles]
-
A.
GEOC
GEOC is the commonly used abbreviation for the Division of Geochemistry, a professional group focused on the study of the chemical composition and processes of the Earth.
-
B.
GEO reports
GEO reports are flagship United Nations environmental assessment publications that periodically evaluate the state of the global environment, emerging trends, and policy options for sustainable development.
-
C.
GEO
GEO is the three-letter ISO 3166-1 alpha-3 country code representing the nation of Georgia.
-
D.
GEOBASE
GEOBASE is a bibliographic database specializing in worldwide research literature on geology, geography, earth sciences, ecology, and related environmental disciplines.
-
E.
GEG
GEG is the three-letter IATA airport code for Spokane International Airport in Spokane, Washington.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: GEO Profiles Target entity description: GEO Profiles is a component of NCBI’s Gene Expression Omnibus that provides gene-centered views of expression data across multiple experiments and conditions.
-
A.
GEOC
GEOC is the commonly used abbreviation for the Division of Geochemistry, a professional group focused on the study of the chemical composition and processes of the Earth.
-
B.
GEO reports
GEO reports are flagship United Nations environmental assessment publications that periodically evaluate the state of the global environment, emerging trends, and policy options for sustainable development.
-
C.
GEO
GEO is the three-letter ISO 3166-1 alpha-3 country code representing the nation of Georgia.
-
D.
GEOBASE
GEOBASE is a bibliographic database specializing in worldwide research literature on geology, geography, earth sciences, ecology, and related environmental disciplines.
-
E.
GEG
GEG is the three-letter IATA airport code for Spokane International Airport in Spokane, Washington.
- F. None of above. chosen
Statements (49)
| Predicate | Object |
|---|---|
| instanceOf |
NCBI database resource
ⓘ
bioinformatics tool ⓘ |
| accessModel | open access ⓘ |
| cost | free of charge ⓘ |
| dataType |
experiment-level expression summaries
ⓘ
normalized expression values ⓘ sample-level expression measurements ⓘ |
| enables |
comparative analysis of gene expression across studies
ⓘ
hypothesis generation from public expression data ⓘ identification of expression patterns ⓘ |
| focusesOn |
gene expression
ⓘ
high-throughput sequencing expression data ⓘ microarray data ⓘ transcriptome data ⓘ |
| hasParentOrganization |
NIH
ⓘ
linked to:
National Institutes of Health
National Institutes of Health ⓘ |
| hasURL | https://www.ncbi.nlm.nih.gov/geoprofiles ⓘ |
| integratesWith |
NCBI Entrez system
ⓘ
linked to:
Entrez system
NCBI GEO browser ⓘ
linked to:
Gene Expression Omnibus
NCBI Gene ⓘ
linked to:
NCBI Gene database
|
| intendedFor |
bioinformaticians
ⓘ
biologists ⓘ medical researchers ⓘ |
| language | English ⓘ |
| locatedIn |
United States
ⓘ
linked to:
United States of America
|
| maintainedBy |
NCBI
ⓘ
National Center for Biotechnology Information ⓘ |
| operatedBy |
NLM
ⓘ
linked to:
United States National Library of Medicine
National Library of Medicine ⓘ
linked to:
United States National Library of Medicine
|
| partOf |
Gene Expression Omnibus
ⓘ
NCBI GEO ⓘ
linked to:
GEO DataSets
|
| provides |
expression profiles across multiple conditions
ⓘ
expression profiles across multiple experiments ⓘ gene-centered views of expression data ⓘ graphical display of expression values ⓘ links to GEO DataSets ⓘ links to GEO Samples ⓘ links to GEO Series ⓘ searchable gene expression summaries ⓘ tabular display of expression values ⓘ |
| supports |
accession-based search
ⓘ
experimental condition filtering ⓘ gene symbol search ⓘ keyword-based search ⓘ organism-based filtering ⓘ tissue-based filtering ⓘ |
| usesDataFrom |
GEO DataSets
ⓘ
GEO Samples ⓘ GEO Series ⓘ
linked to:
GEO
|
How these facts were elicited
The pipeline generated the facts above by prompting gpt-5.1 with this entity's name + description and the instruction below.
Instruction
You are a knowledge base construction expert. Given a subject entity and a description of it, return factual statements that you know for the subject as a JSON list of dictionaries(triples), where keys must be "subject", "predicate" and "object". The number of facts may be very high, between 25 to 50 or more, for very popular subjects. For less popular subjects, the number of facts can be very low, like 5 or 10. # Requirements - If you don't know the subject at all, return an empty list. - If the subject is not a named entity, return an empty list. - Include at least one triple where predicate is "instanceOf". - Do not get too wordy. - Separate several objects into multiple triples with one object.
Input
Subject: GEO Profiles Description of subject: GEO Profiles is a component of NCBI’s Gene Expression Omnibus that provides gene-centered views of expression data across multiple experiments and conditions.
Referenced by (1)
Full triples — surface form annotated when it differs from this entity's canonical label.