Taxonomy Browser
E569118
Taxonomy Browser is an online NCBI tool that allows users to explore and retrieve information about the classification and nomenclature of organisms across the tree of life.
All labels observed (2)
| Label | Occurrences |
|---|---|
| Taxonomy | 1 |
| Taxonomy Browser canonical | 1 |
How this entity was disambiguated
This entity first appeared as the object of triple T6098252 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: Taxonomy Browser Context triple: [National Center for Biotechnology Information, hasService, Taxonomy Browser]
-
A.
Wikispecies
Wikispecies is a Wikimedia Foundation project that serves as a free, collaborative directory of species and taxonomic information.
-
B.
Tropicos botanical database
Tropicos botanical database is an online resource maintained by the Missouri Botanical Garden that provides comprehensive taxonomic and nomenclatural information on plant species worldwide.
-
C.
FlyBase
FlyBase is a comprehensive online database of genetic and genomic information for the fruit fly Drosophila and related species.
-
D.
Global Biodiversity Information Facility
The Global Biodiversity Information Facility (GBIF) is an international open-data infrastructure that provides free access to biodiversity occurrence records from institutions and citizen-science projects worldwide.
-
E.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: Taxonomy Browser Target entity description: Taxonomy Browser is an online NCBI tool that allows users to explore and retrieve information about the classification and nomenclature of organisms across the tree of life.
-
A.
Wikispecies
Wikispecies is a Wikimedia Foundation project that serves as a free, collaborative directory of species and taxonomic information.
-
B.
Tropicos botanical database
Tropicos botanical database is an online resource maintained by the Missouri Botanical Garden that provides comprehensive taxonomic and nomenclatural information on plant species worldwide.
-
C.
FlyBase
FlyBase is a comprehensive online database of genetic and genomic information for the fruit fly Drosophila and related species.
-
D.
Global Biodiversity Information Facility
The Global Biodiversity Information Facility (GBIF) is an international open-data infrastructure that provides free access to biodiversity occurrence records from institutions and citizen-science projects worldwide.
-
E.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
- F. None of above. chosen
Statements (56)
| Predicate | Object |
|---|---|
| instanceOf |
NCBI web application
ⓘ
online bioinformatics tool ⓘ |
| accessCost | free ⓘ |
| dataScope |
all domains of life
ⓘ
archaea ⓘ bacteria ⓘ environmental samples ⓘ eukaryotes ⓘ uncultured organisms ⓘ viroids ⓘ viruses ⓘ |
| hasOutput |
links to related NCBI records
ⓘ
taxon summary page ⓘ taxonomic lineage report ⓘ |
| hasPurpose |
explore taxonomy of organisms
ⓘ
provide organism nomenclature data ⓘ retrieve taxonomic information ⓘ |
| hostedAt | https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/ ⓘ |
| integratedWith |
NCBI Assembly database
ⓘ
linked to:
NCBI databases
NCBI BLAST ⓘ
linked to:
BLAST
NCBI BioProject database ⓘ
linked to:
BioProject database
NCBI BioSample database ⓘ
linked to:
BioSample database
NCBI Genome database ⓘ
linked to:
NCBI databases
NCBI Nucleotide database ⓘ
linked to:
NCBI databases
NCBI Protein database ⓘ
linked to:
Protein database
|
| isAccessibleVia | web browser ⓘ |
| maintainedBy | National Center for Biotechnology Information ⓘ |
| partOf |
NCBI Entrez system
ⓘ
linked to:
Entrez system
|
| providesInformationOn |
GenBank taxonomy identifiers
ⓘ
common names of organisms ⓘ lineage of organisms ⓘ scientific names of organisms ⓘ synonyms of organism names ⓘ taxonomic classification ⓘ taxonomic rank ⓘ |
| supportsFeature |
browsing taxonomic tree
ⓘ
displaying taxonomic lineage in hierarchical form ⓘ displaying taxonomic lineage in text form ⓘ filtering by rank ⓘ links to PubMed ⓘ links to genome assemblies ⓘ links to nucleotide databases ⓘ links to protein databases ⓘ links to sequence databases ⓘ navigating child taxa ⓘ navigating parent taxa ⓘ showing curated taxonomic comments ⓘ showing external taxonomy links ⓘ showing type material information when available ⓘ viewing sibling taxa ⓘ |
| supportsSearchBy |
common name
ⓘ
partial name strings ⓘ scientific name ⓘ taxon ID ⓘ |
| updatedBy | NCBI taxonomy curators ⓘ |
| usesDatabase |
NCBI Taxonomy database
ⓘ
linked to:
NCBI databases
|
How these facts were elicited
The pipeline generated the facts above by prompting gpt-5.1 with this entity's name + description and the instruction below.
Instruction
You are a knowledge base construction expert. Given a subject entity and a description of it, return factual statements that you know for the subject as a JSON list of dictionaries(triples), where keys must be "subject", "predicate" and "object". The number of facts may be very high, between 25 to 50 or more, for very popular subjects. For less popular subjects, the number of facts can be very low, like 5 or 10. # Requirements - If you don't know the subject at all, return an empty list. - If the subject is not a named entity, return an empty list. - Include at least one triple where predicate is "instanceOf". - Do not get too wordy. - Separate several objects into multiple triples with one object.
Input
Subject: Taxonomy Browser Description of subject: Taxonomy Browser is an online NCBI tool that allows users to explore and retrieve information about the classification and nomenclature of organisms across the tree of life.
Referenced by (2)
Full triples — surface form annotated when it differs from this entity's canonical label.
linked to: Taxonomy Browser