GEOquery package
E1274396
UNEXPLORED
The GEOquery package is an R/Bioconductor tool that facilitates downloading and importing gene expression and other functional genomics data from NCBI’s Gene Expression Omnibus (GEO) into R for analysis.
All labels observed (1)
| Label | Occurrences |
|---|---|
| GEOquery package canonical | 1 |
How this entity was disambiguated
This entity first appeared as the object of triple T17521736 — resolving that mention is where its identity was fixed. The disambiguator weighed these candidate entities and picked the highlighted one (or “None”, minting a new entity). This is how homonymy is resolved: the same surface form can point to different entities.
NED1
Entity disambiguation (via context triple)
gpt-5-mini-2025-08-07
Target entity: GEOquery package Context triple: [Bioconductor, hasComponent, GEOquery package]
-
A.
GEO DataSets
GEO DataSets is a public NCBI repository that organizes and provides access to curated gene expression and other functional genomics experiment data.
-
B.
GEO reports
GEO reports are flagship United Nations environmental assessment publications that periodically evaluate the state of the global environment, emerging trends, and policy options for sustainable development.
-
C.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
D.
Genome Data Viewer
Genome Data Viewer is an NCBI web-based genome browser that allows users to visualize, explore, and analyze annotated genomic sequences and features.
-
E.
Bioconductor
Bioconductor is an open-source project that provides R packages and tools for the analysis and comprehension of high-throughput genomic and biological data.
- F. None of above. chosen
- G. Unsure - the case is ambiguous/there is not enough information to decide.
NED2
Entity disambiguation (via description)
gpt-5-mini-2025-08-07
Target entity: GEOquery package Target entity description: The GEOquery package is an R/Bioconductor tool that facilitates downloading and importing gene expression and other functional genomics data from NCBI’s Gene Expression Omnibus (GEO) into R for analysis.
-
A.
GEO DataSets
GEO DataSets is a public NCBI repository that organizes and provides access to curated gene expression and other functional genomics experiment data.
-
B.
GEO reports
GEO reports are flagship United Nations environmental assessment publications that periodically evaluate the state of the global environment, emerging trends, and policy options for sustainable development.
-
C.
NCBI E-utilities API
The NCBI E-utilities API is a set of programmatic web services that allow automated querying, retrieval, and integration of data from NCBI databases such as PubMed.
-
D.
Genome Data Viewer
Genome Data Viewer is an NCBI web-based genome browser that allows users to visualize, explore, and analyze annotated genomic sequences and features.
-
E.
Bioconductor
Bioconductor is an open-source project that provides R packages and tools for the analysis and comprehension of high-throughput genomic and biological data.
- F. None of above. chosen
Referenced by (1)
Full triples — surface form annotated when it differs from this entity's canonical label.