Statements (50)
| Predicate | Object |
|---|---|
| gptkbp:instance_of |
gptkb:file_format
|
| gptkbp:bfsLayer |
4
|
| gptkbp:bfsParent |
gptkb:Human_Genome_Project
|
| gptkbp:available_formats |
genomic data exchange
|
| gptkbp:defines |
BED specification
|
| gptkbp:developed_by |
UCSC Genome Bioinformatics
|
| gptkbp:has_expansion |
.bed
|
| gptkbp:has_transformation |
GFF format
GTF format |
| https://www.w3.org/2000/01/rdf-schema#label |
BED format
|
| gptkbp:includes |
gptkb:nickname
gptkb:Magic:_The_Gathering_set strand additional columns chromosome name end position item Rgb start position thick End thick Start |
| gptkbp:is_compatible_with |
gptkb:UCSC_Genome_Browser
|
| gptkbp:is_often_used_in |
bioinformatics
comparative genomics genomics research variant calling functional genomics genome annotation genome assembly metagenomics genome-wide association studies (GWAS) epigenomics studies |
| gptkbp:is_related_to |
GFF format
GTF format |
| gptkbp:is_supported_by |
most genomic software
|
| gptkbp:is_used_for |
gptkb:computer
data analysis data sharing storing genomic regions visualization of genomic data |
| gptkbp:is_used_in |
RNA-seq analysis
Ch IP-seq analysis DNA-seq analysis |
| gptkbp:produced_by |
bioinformatics tools
|
| gptkbp:product_line |
gptkb:theorem
|
| gptkbp:reader_demographic |
gptkb:theorem
|
| gptkbp:represents |
gene annotations
exon regions transcript regions |
| gptkbp:supports |
multiple features
|
| gptkbp:type_of |
text file
|